STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM72481.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
SEM72513.1
Helix-turn-helix domain-containing protein.
 
     0.912
SEN21624.1
Hypothetical protein.
  
     0.729
SEN47017.1
Hypothetical protein.
  
     0.612
SEM72544.1
Hypothetical protein.
       0.539
SEL01020.1
Hypothetical protein.
  
     0.524
SEN22185.1
Hypothetical protein.
  
     0.501
SEM50009.1
Protein of unknown function.
  
     0.489
SEM58641.1
Hypothetical protein.
  
     0.473
SEL42970.1
NB-ARC domain-containing protein.
  
     0.464
SEL27845.1
Protein of unknown function DUF43.
  
     0.448
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.