STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM80642.13-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase. (285 aa)    
Predicted Functional Partners:
SEL70383.1
Exonuclease III.
  
 0.856
SEN62405.1
Exodeoxyribonuclease-3.
  
 0.856
SEN39593.1
Metal binding domain of Ada.
  
 
 0.741
SEM80673.1
Nucleotidyltransferase.
  
    0.659
SEK98478.1
ATP-dependent DNA ligase.
 
  
 0.615
SEM80602.1
FO synthase subunit 1 /FO synthase subunit 2.
       0.580
SEM88739.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
 
     0.578
SEN07644.1
Endonuclease IV.
  
 
 
 0.569
SEM80703.1
Glycosyltransferase involved in cell wall bisynthesis.
   
   0.547
dinB-2
DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
 
 0.543
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.