STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM88266.1N-acetylmuramoyl-L-alanine amidase. (637 aa)    
Predicted Functional Partners:
SEN58429.1
Peptidase_C39 like family protein.
 
     0.765
SEM34033.1
Peptidase_C39 like family protein.
 
     0.764
SEK57633.1
Acetyltransferase (GNAT) family protein.
  
    0.614
SEL82366.1
Protein N-acetyltransferase, RimJ/RimL family.
  
    0.596
SEM88291.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.516
SEN05325.1
DNA-binding transcriptional activator of the SARP family.
  
     0.433
SEM35145.1
Hypothetical protein.
  
     0.430
SEM15104.1
Hypothetical protein.
  
     0.423
SEK36398.1
Hypothetical protein.
  
     0.412
SEK41092.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.407
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.