STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM91978.1Oxidoreductase family, C-terminal alpha/beta domain. (410 aa)    
Predicted Functional Partners:
SEM18563.1
Hypothetical protein.
  
     0.612
SEM92002.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.554
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.549
SEM15299.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
  
 0.537
SEL93405.1
Hypothetical protein.
  
     0.524
SEM15278.1
5-deoxyglucuronate isomerase.
  
  
 0.516
SEK40742.1
2-keto-myo-inositol dehydratase.
  
 
  0.476
SEM15059.1
2-keto-myo-inositol dehydratase.
  
 
  0.476
SEN23144.1
Hypothetical protein.
  
     0.471
SEN66420.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
  
     0.469
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.