STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN19949.1Protoporphyrin IX magnesium-chelatase. (705 aa)    
Predicted Functional Partners:
SEN19843.1
Cobaltochelatase CobN subunit.
 
 0.989
SEK38938.1
Magnesium chelatase subunit I.
  
 0.977
cobB-2
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.970
SEN19925.1
cob(I)alamin adenosyltransferase.
 
   
 0.955
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.916
SEL71837.1
Von Willebrand factor type A domain-containing protein.
  
 0.887
SEL79258.1
Ca-activated chloride channel family protein.
  
 0.887
SEM80565.1
Von Willebrand factor type A domain-containing protein.
  
 0.887
SEN03859.1
Uncharacterized protein, contains a von Willebrand factor type A (vWA) domain.
  
 0.887
SEN64004.1
Von Willebrand factor type A domain-containing protein.
  
 0.887
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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