STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN42110.1Two component transcriptional regulator, LuxR family. (218 aa)    
Predicted Functional Partners:
SEN42138.1
Signal transduction histidine kinase.
   0.900
SEL47850.1
Hypothetical protein.
   
 0.880
SEN73633.1
Signal transduction histidine kinase.
  
   0.609
SEL51621.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  0.592
SEL27277.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
   
  0.589
SEN00938.1
Signal transduction histidine kinase.
  
   0.584
SEN42160.1
Hypothetical protein.
       0.574
SEM76469.1
Signal transduction histidine kinase.
  
   0.572
SEL84753.1
PAS domain S-box-containing protein.
 
  0.570
SEN77989.1
Signal transduction histidine kinase.
  
   0.558
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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