STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN51081.1Serine/threonine protein kinase. (520 aa)    
Predicted Functional Partners:
SEL41279.1
Protein phosphatase.
 0.835
SEN15507.1
Protein phosphatase.
 0.835
SEL80694.1
Zinc-ribbon domain-containing protein.
  
 
 
 0.831
SEM97223.1
Protein kinase domain-containing protein.
  
     0.678
SEL47850.1
Hypothetical protein.
   
 0.654
SEL41348.1
FHA domain-containing protein.
 
 
 
 0.578
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.533
SEL41148.1
Serine/threonine protein kinase.
 
  
0.523
SEL22383.1
Serine/threonine protein kinase.
 
  
0.521
SEL41306.1
FHA domain-containing protein.
 
 
 
 0.512
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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