STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN66394.1Predicted dehydrogenase. (342 aa)    
Predicted Functional Partners:
SEN66420.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
 
    
0.838
SEN66295.1
Hypothetical protein.
       0.773
SEN66348.1
Beta-galactosidase.
       0.773
SEK75546.1
Predicted dehydrogenase.
  
     0.764
SEK25694.1
Predicted dehydrogenase.
  
     0.760
SEN66463.1
N-acetylglucosamine transport system permease protein.
 
     0.709
SEL48258.1
Predicted dehydrogenase.
  
     0.706
SEN66491.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.671
SEN66531.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
       0.671
SEK95860.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.667
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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