STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN68118.1Ig-like domain (group 2). (1249 aa)    
Predicted Functional Partners:
SEL68960.1
Competence protein ComEC.
  
  
 0.834
SEK95203.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family.
  
  
 0.697
SEL68936.1
Competence protein ComEA.
  
  
 0.689
SEN68155.1
Multiple sugar transport system permease protein.
       0.668
SEN68188.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
       0.668
SEN68221.1
Multiple sugar transport system substrate-binding protein.
       0.668
SEL47850.1
Hypothetical protein.
   
 0.643
SEM15747.1
DNA processing protein.
  
  
 0.579
SEN88221.1
Protein of unknown function.
  
  
 0.579
SEM79408.1
Predicted amidophosphoribosyltransferases.
  
  
 0.456
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.