STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN68288.1Beta-galactosidase. (567 aa)    
Predicted Functional Partners:
SEK86288.1
Alpha-galactosidase.
 
  
  0.909
SEN60718.1
Sialidase-1.
  
 0.896
SEL84229.1
Beta-galactosidase.
 
 
 0.798
SEL66717.1
Aldose 1-epimerase.
 
 
 0.775
SEM35727.1
alpha-L-fucosidase.
 
  
 0.722
SEL56152.1
alpha-L-fucosidase.
 
  
 0.716
SEM36910.1
Aldose 1-epimerase.
  
 
 0.708
SEN36539.1
alpha-L-fucosidase.
 
  
 0.682
SEM44313.1
Melibiase.
    
  0.652
SEN67214.1
Alpha-galactosidase.
    
  0.652
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.