STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN81652.1Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. (459 aa)    
Predicted Functional Partners:
SEN81685.1
ThiF family protein.
 
     0.831
SEL20899.1
Polyketide cyclase / dehydrase and lipid transport.
  
 
 
 0.818
SEN40529.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.759
SEL50412.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
  
     0.703
SEL50444.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
  
     0.702
SEL53075.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.662
SEL53055.1
UDP-glucose 4-epimerase.
  
    0.596
SEN40721.1
Putative sensory transduction regulator.
  
     0.561
SEL53574.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.544
SEM09914.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
    0.519
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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