STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00214Proly 4-hydroxylase. (482 aa)    
Predicted Functional Partners:
AMSG_05138
Ribosomal_L7Ae domain-containing protein.
    
 0.595
AMSG_05621
Protein disulfide-isomerase.
    
 0.595
AMSG_07575
Protein disulfide-isomerase A4.
    
 0.595
AMSG_09059
Uncharacterized protein.
    
 0.595
AMSG_10015
Protein disulfide isomerase A.
    
 0.595
AMSG_12452
Uncharacterized protein.
    
 0.595
AMSG_09684
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
 
 0.578
AMSG_00837
Uncharacterized protein.
   
   0.570
AMSG_06009
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.570
AMSG_07644
Uncharacterized protein.
   
   0.405
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.