STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00188Phosphatase tensin domain-containing protein. (347 aa)    
Predicted Functional Partners:
AMSG_00172
Endonuclease/Exonuclease/phosphatase.
   
 
 0.788
AMSG_07410
Inositol 5-phosphatase 1.
   
 
 0.788
AMSG_07221
Arginyl-tRNA-protein transferase 1.
    
 0.720
AMSG_01038
Uncharacterized protein.
    
 0.720
AMSG_01214
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.720
AMSG_08942
SprT-like domain-containing protein.
   
    0.698
AMSG_03460
Protein kinase subdomain-containing protein.
    
 0.692
AMSG_12329
Uncharacterized protein.
    
 0.680
AMSG_01210
Uncharacterized protein.
    
 0.673
AMSG_09513
CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 0.667
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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