STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02693Uncharacterized protein. (382 aa)    
Predicted Functional Partners:
AMSG_07622
ATP/GTP/Ca++ binding protein.
    
 0.649
AMSG_07690
Tetratricopeptide repeat domain 18.
    
 0.649
AMSG_01793
Uncharacterized protein.
    
 0.649
AMSG_04916
Ras-like C3 botulinum toxin substrate 1.
    
 0.579
AMSG_00439
Cell division control protein 42.
    
 0.579
AMSG_04690
Ras-like C3 botulinum toxin substrate 1.
    
 0.579
AMSG_10025
Rac2 protein.
    
 0.579
AMSG_10026
Rho GTPase.
    
 0.579
AMSG_01748
Uncharacterized protein.
    
 0.579
AMSG_01820
Uncharacterized protein.
    
 0.579
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.