Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMSG_01540 | AMSG_02318 | A0A0L0DQW3 | A0A0L0DVZ5 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12. | 0.999 |
AMSG_01540 | AMSG_02987 | A0A0L0DQW3 | A0A0L0D2L3 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.848 |
AMSG_01540 | AMSG_03605 | A0A0L0DQW3 | A0A0L0D489 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.999 |
AMSG_01540 | AMSG_06912 | A0A0L0DQW3 | A0A0L0DDN1 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | DEAD box polypeptide 52. | 0.805 |
AMSG_01540 | AMSG_11670 | A0A0L0DQW3 | A0A0L0DTL4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | CP-type G domain-containing protein. | 0.999 |
AMSG_01840 | AMSG_02987 | A0A0L0DTL0 | A0A0L0D2L3 | ANAPC4_WD40 domain-containing protein. | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.732 |
AMSG_01840 | AMSG_05429 | A0A0L0DTL0 | A0A0L0DAN9 | ANAPC4_WD40 domain-containing protein. | RRM domain-containing protein. | 0.702 |
AMSG_01840 | AMSG_10074 | A0A0L0DTL0 | A0A0L0DPT5 | ANAPC4_WD40 domain-containing protein. | ATP-dependent RNA helicase DBP5. | 0.900 |
AMSG_02318 | AMSG_01540 | A0A0L0DVZ5 | A0A0L0DQW3 | Ribosome biogenesis protein WDR12. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
AMSG_02318 | AMSG_02987 | A0A0L0DVZ5 | A0A0L0D2L3 | Ribosome biogenesis protein WDR12. | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.736 |
AMSG_02318 | AMSG_03605 | A0A0L0DVZ5 | A0A0L0D489 | Ribosome biogenesis protein WDR12. | Uncharacterized protein. | 0.991 |
AMSG_02318 | AMSG_06912 | A0A0L0DVZ5 | A0A0L0DDN1 | Ribosome biogenesis protein WDR12. | DEAD box polypeptide 52. | 0.788 |
AMSG_02318 | AMSG_11670 | A0A0L0DVZ5 | A0A0L0DTL4 | Ribosome biogenesis protein WDR12. | CP-type G domain-containing protein. | 0.991 |
AMSG_02987 | AMSG_01540 | A0A0L0D2L3 | A0A0L0DQW3 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.848 |
AMSG_02987 | AMSG_01840 | A0A0L0D2L3 | A0A0L0DTL0 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | ANAPC4_WD40 domain-containing protein. | 0.732 |
AMSG_02987 | AMSG_02318 | A0A0L0D2L3 | A0A0L0DVZ5 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein WDR12. | 0.736 |
AMSG_02987 | AMSG_03605 | A0A0L0D2L3 | A0A0L0D489 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.800 |
AMSG_02987 | AMSG_05429 | A0A0L0D2L3 | A0A0L0DAN9 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | RRM domain-containing protein. | 0.768 |
AMSG_02987 | AMSG_06912 | A0A0L0D2L3 | A0A0L0DDN1 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DEAD box polypeptide 52. | 0.739 |
AMSG_02987 | AMSG_09035 | A0A0L0D2L3 | A0A0L0DN87 | DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Splicing factor 3B subunit 1. | 0.748 |
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