STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_0300440S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (194 aa)    
Predicted Functional Partners:
AMSG_00029
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
AMSG_00005
Ribosomal protein rpl31.
   
 
 0.999
AMSG_03123
30S ribosomal protein S9.
  
 0.999
AMSG_03311
50S ribosomal protein L15.
  
 
 0.999
AMSG_00100
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
AMSG_03502
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
AMSG_03618
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
AMSG_03569
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
AMSG_03714
50S ribosomal protein L37a.
   
 
 0.999
AMSG_02938
50S ribosomal protein L4.
  
 0.999
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.