STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_0331150S ribosomal protein L15. (270 aa)    
Predicted Functional Partners:
AMSG_00029
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
AMSG_03004
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.999
AMSG_03123
30S ribosomal protein S9.
  
 
 0.999
AMSG_03502
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
AMSG_02938
50S ribosomal protein L4.
  
 0.999
AMSG_03013
50S ribosomal protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
AMSG_00474
Uncharacterized protein.
   
 
 0.999
AMSG_04412
39S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
  
 0.999
AMSG_05738
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
AMSG_08442
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.999
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.