STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00181Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (105 aa)    
Predicted Functional Partners:
AMSG_04057
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
AMSG_05036
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
AMSG_05753
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
AMSG_07625
50S ribosomal protein L19e.
   
 0.999
AMSG_00005
Ribosomal protein rpl31.
  
 0.998
AMSG_03502
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 0.998
AMSG_03569
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.998
AMSG_04094
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.998
AMSG_00492
50S ribosomal protein L34e.
   
 0.998
AMSG_05004
Ribos_L4_asso_C domain-containing protein.
   
 0.998
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.