STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00186Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (150 aa)    
Predicted Functional Partners:
AMSG_10940
Allatostatin protein.
   
 0.993
AMSG_05947
RRM domain-containing protein.
 
   
 0.952
AMSG_09475
Peptidylprolyl isomerase.
 
 0.906
AMSG_03314
Small ubiquitin modifier 2.
   
 0.791
AMSG_02751
Adenine nucleotide translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.771
AMSG_01370
DEAD/DEAH box helicase domain-containing protein.
   
 0.771
AMSG_07299
Ran-specific GTPase-activating protein.
 
 
 0.767
AMSG_06760
Histone H2A.
    
  0.764
AMSG_01851
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.759
AMSG_02635
Uncharacterized protein.
   
 0.755
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.