STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_03506WD repeat-containing protein 90. (1769 aa)    
Predicted Functional Partners:
AMSG_08963
ANK_REP_REGION domain-containing protein.
    
 0.998
AMSG_00444
Park2 co-regulated.
    
 
 0.997
AMSG_11593
Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.996
AMSG_03474
Uncharacterized protein.
    
 
 0.996
AMSG_03530
Calponin.
    
 
 0.996
AMSG_04454
Enkurin.
    
 
 0.996
AMSG_04500
EF-hand domain-containing family member C2.
    
 
 0.996
AMSG_05462
Flagellar associated protein.
    
 
 0.996
AMSG_02247
Flagellar associated protein.
    
   0.996
AMSG_00717
Flagellar outer dynein arm-docking complex protein 1.
    
   0.972
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.