STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02453Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
AMSG_05953
Prolyl-tRNA synthetase.
  
 
 0.690
AMSG_07435
Proteasome subunit beta; Belongs to the peptidase T1B family.
 
      0.514
AMSG_00154
Prolyl-tRNA synthetase.
  
 
 0.501
AMSG_06894
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.474
AMSG_06579
60S ribosomal protein L39.
  
 
 0.474
AMSG_00751
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.474
AMSG_01671
Gln-Glu non-discriminatory tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.474
AMSG_00843
Pantoate-beta-alanine ligase.
  
    0.460
AMSG_04489
Wd-repeat protein.
   
   0.408
AMSG_03420
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.405
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.