STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02656Omega-amidase NIT2. (289 aa)    
Predicted Functional Partners:
AMSG_09298
Uncharacterized protein.
     
 0.775
AMSG_03985
Spermidine synthase.
  
 
 0.715
AMSG_03187
Arginase; Belongs to the arginase family.
  
 0.679
AMSG_01173
Holocarboxylase synthetase 1.
    
 0.677
AMSG_11403
Dihydropyrimidine dehydrogenase (NADP+).
  
 0.670
AMSG_08806
Dihydropyrimidinase.
  
 
 0.659
AMSG_11769
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
    
 0.654
AMSG_07562
NAD-specific glutamate dehydrogenase.
   
 
 0.654
AMSG_09789
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.654
AMSG_08179
4-hydroxyphenylpyruvate dioxygenase.
   
 0.651
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.