STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02596DUF2431 domain-containing protein. (237 aa)    
Predicted Functional Partners:
AMSG_03828
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.736
AMSG_07815
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.658
AMSG_04702
Uncharacterized protein.
   
  
 0.465
AMSG_04895
BTB domain-containing protein.
   
 
 0.458
AMSG_07820
Brix domain-containing protein 1.
   
    0.455
AMSG_01318
Ribosome biogenesis protein RLP24.
   
   0.444
AMSG_07324
rRNA-processing protein FCF2.
   
  
 0.442
AMSG_00499
Brix domain-containing protein 2.
   
    0.441
AMSG_12093
Uncharacterized protein.
   
    0.435
AMSG_02857
RRM domain-containing protein.
   
    0.431
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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