STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_03951Allergen V5/Tpx-1 family protein. (233 aa)    
Predicted Functional Partners:
AMSG_00674
Aldolase_II domain-containing protein.
   
 0.573
AMSG_04916
Ras-like C3 botulinum toxin substrate 1.
     
 0.464
AMSG_00439
Cell division control protein 42.
     
 0.464
AMSG_04690
Ras-like C3 botulinum toxin substrate 1.
     
 0.464
AMSG_10025
Rac2 protein.
     
 0.464
AMSG_10026
Rho GTPase.
     
 0.464
AMSG_01748
Uncharacterized protein.
     
 0.464
AMSG_01820
Uncharacterized protein.
     
 0.464
AMSG_01747
Rac1 GTP binding protein.
     
 0.464
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.