STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04398Uncharacterized protein. (870 aa)    
Predicted Functional Partners:
AMSG_09571
Uncharacterized protein.
    
 0.818
AMSG_04916
Ras-like C3 botulinum toxin substrate 1.
    
 0.644
AMSG_00439
Cell division control protein 42.
    
 0.644
AMSG_04690
Ras-like C3 botulinum toxin substrate 1.
    
 0.644
AMSG_10025
Rac2 protein.
    
 0.644
AMSG_10026
Rho GTPase.
    
 0.644
AMSG_01748
Uncharacterized protein.
    
 0.644
AMSG_01820
Uncharacterized protein.
    
 0.644
AMSG_01747
Rac1 GTP binding protein.
    
 0.644
AMSG_03413
Serine/threonine protein kinase.
   
 0.617
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.