STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04450Uncharacterized protein. (614 aa)    
Predicted Functional Partners:
AMSG_00072
UBX domain-containing protein.
   
 
  0.986
AMSG_05478
Hypoxia up-regulated protein 1.
   
 0.807
AMSG_06211
SGF29 C-terminal domain-containing protein.
    
 0.789
AMSG_04161
Cytoplasmic ATPase that is a ribosome-associated molecular chaperone.
   
 0.742
AMSG_06968
Hsp71-like protein; Belongs to the heat shock protein 70 family.
   
 0.742
AMSG_07959
Heat shock protein 70; Belongs to the heat shock protein 70 family.
   
 0.742
AMSG_09165
Heat shock protein 70; Belongs to the heat shock protein 70 family.
   
 0.742
AMSG_09896
Hsp70-like protein; Belongs to the heat shock protein 70 family.
   
 0.742
AMSG_11172
Hsp71-like protein; Belongs to the heat shock protein 70 family.
   
 0.742
AMSG_06915
Uncharacterized protein.
    
 0.741
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.