STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04557Ribonuclease P/MRP protein subunit POP5. (115 aa)    
Predicted Functional Partners:
AMSG_04853
Ribonuclease P protein subunit p21.
   
 0.999
AMSG_04704
Ribonuclease P/MRP 30kDa subunit.
  
 0.999
AMSG_12128
Uncharacterized protein.
    
 0.999
AMSG_02259
Ribonuclease P protein subunit p29.
   
 0.999
AMSG_11790
Alba domain-containing protein.
   
 0.976
AMSG_06371
KRR1-interacting protein.
   
 0.966
AMSG_01735
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.950
AMSG_12326
Fe2OG dioxygenase domain-containing protein.
   
 0.908
AMSG_05378
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.907
AMSG_03618
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.870
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.