STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04887PHB domain-containing protein. (295 aa)    
Predicted Functional Partners:
AMSG_04970
Intermembrane space AAA protease IAP-1; Belongs to the AAA ATPase family.
   
 0.773
AMSG_03069
Chaperone BCS1.
   
 0.747
AMSG_03827
Chaperone BCS1; Belongs to the AAA ATPase family.
   
 0.747
AMSG_07848
AAA domain-containing protein.
   
 0.747
AMSG_12197
WD_REPEATS_REGION domain-containing protein.
   
 0.747
AMSG_03007
Processing peptidase beta subunit.
  
 0.614
AMSG_11281
Peptidase subunit alpha; Belongs to the peptidase M16 family.
  
 0.608
AMSG_02316
Uncharacterized protein.
  
 0.608
AMSG_05221
RHOMBOID-like protein.
   
 0.601
AMSG_09787
Prohibitin.
   
 
 0.580
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.