STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00489MTMR14 protein. (505 aa)    
Predicted Functional Partners:
AMSG_04830
Alcohol dehydrogenase.
     
 0.532
AMSG_08723
Uncharacterized protein.
     
 0.531
AMSG_10786
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
    
  0.506
AMSG_11664
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
  0.506
AMSG_11665
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.506
AMSG_01000
Uncharacterized protein.
   
 
 0.497
AMSG_04906
Uncharacterized protein.
     
 0.476
AMSG_05032
Myotubularin.
     
 0.476
AMSG_08167
Myotubularin.
     
 0.476
AMSG_00674
Aldolase_II domain-containing protein.
    
  0.457
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.