STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_03914Protein phosphatase 1 regulatory subunit 7. (327 aa)    
Predicted Functional Partners:
AMSG_00553
Nuclear lim interactor-interacting factor.
 
      0.762
AMSG_09958
Serine/threonine-protein phosphatase dullard-A.
 
      0.731
AMSG_00443
Uncharacterized protein.
    
 0.671
AMSG_06696
Glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
    
  0.652
AMSG_05062
Small nuclear ribonucleoprotein Sm D3.
    
 0.620
AMSG_02462
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.618
AMSG_11749
Sm domain-containing protein.
    
  0.616
AMSG_04178
Small nuclear ribonucleoprotein SmG.
   
  0.612
AMSG_11737
RRM domain-containing protein.
    
 0.590
AMSG_02093
U1 small nuclear ribonucleoprotein A.
    
 0.590
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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