STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00516NEK/NEK1 protein kinase. (442 aa)    
Predicted Functional Partners:
AMSG_09204
UVB-resistance protein UVR8.
 
  
   0.811
AMSG_03438
NEK/NEK6 protein kinase.
  
 
0.617
AMSG_10488
PLK/SAK protein kinase.
  
 
0.562
AMSG_03791
Cell division control protein 2; Belongs to the protein kinase superfamily.
  
 
 
0.507
AMSG_05313
Serine/threonine-protein kinase PLK.
   
 
0.494
AMSG_11470
Serine/threonine-protein kinase PLK.
   
 
0.494
AMSG_08314
RNA-binding protein cabeza.
   
  0.488
AMSG_01562
RanBP2-type domain-containing protein.
   
  0.488
AMSG_06890
Serine/threonine protein kinase.
   
 
  0.452
AMSG_03352
G2/mitotic-specific cyclin-B; Belongs to the cyclin family.
   
 
  0.449
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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