STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00373ATP-dependent Clp protease, ATP-binding subunit ClpX. (460 aa)    
Predicted Functional Partners:
AMSG_05314
ATP-dependent Clp protease proteolytic subunit.
 0.999
AMSG_02593
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
    
 0.748
AMSG_04970
Intermembrane space AAA protease IAP-1; Belongs to the AAA ATPase family.
 
  
 0.713
AMSG_03204
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.693
AMSG_08648
Lon protease homolog; Belongs to the peptidase S16 family.
 
 
 0.662
AMSG_10728
Phosphoglycolate phosphatase.
  
  
 0.644
AMSG_01206
Delta-1-pyrroline-5-carboxylate synthetase.
     
 0.630
AMSG_03724
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
  
 0.624
AMSG_04119
Uncharacterized protein.
  
 
 0.618
AMSG_08614
Uncharacterized protein.
  
 
 0.618
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.