STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00388Binding/protein transporter. (852 aa)    
Predicted Functional Partners:
AMSG_10940
Allatostatin protein.
   
 0.999
AMSG_01340
Snurportin-1.
    
 0.972
AMSG_08314
RNA-binding protein cabeza.
   
 0.969
AMSG_01562
RanBP2-type domain-containing protein.
   
 0.969
AMSG_08571
Ipo7 protein.
   
 
 0.940
AMSG_12131
IBB domain-containing protein.
   
 0.931
AMSG_01939
Sperm-associated antigen 6.
   
 0.931
AMSG_11193
Guanylate cyclase activator 1A.
   
 0.931
AMSG_00152
Exosome component 10.
    
   0.930
AMSG_07815
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.930
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.