STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04695Ubiquitin-conjugating enzyme E2 D/E; Belongs to the ubiquitin-conjugating enzyme family. (110 aa)    
Predicted Functional Partners:
AMSG_07672
E3 ubiquitin-protein ligase UPL3.
   
 0.998
AMSG_02163
Sterol-binding domain-containing protein.
    
  0.987
AMSG_05697
Glutaryl-CoA dehydrogenase, mitochondrial.
 
  
  0.904
AMSG_02492
Ubiquitin-conjugating enzyme family protein.
   
 0.856
AMSG_01478
Uncharacterized protein.
   
0.856
AMSG_01660
Uncharacterized protein.
    
 0.848
AMSG_08067
Ubiquitin/ribosomal protein S27 fusion protein.
   
 0.817
AMSG_02997
Uncharacterized protein.
    
 0.801
AMSG_03314
Small ubiquitin modifier 2.
   
 0.795
AMSG_11874
Ubiquitin-like domain-containing protein.
   
 0.795
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.