STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04734Carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (260 aa)    
Predicted Functional Partners:
AMSG_09843
Cysteine desulfurylase.
 
    
 0.592
AMSG_08386
WD_REPEATS_REGION domain-containing protein.
 
      0.561
AMSG_05289
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.456
AMSG_09966
Uncharacterized protein.
      
 0.435
AMSG_05748
26S proteasome non-ATPase regulatory subunit 6.
      
 0.428
AMSG_09715
Folate transporter/carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
0.426
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.