STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_05034Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
AMSG_03948
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 0.681
AMSG_04544
Elongation factor 1 alpha long form.
    
 0.681
AMSG_04543
Elongation factor 1 alpha long form.
    
 0.681
AMSG_12311
Uncharacterized protein.
    
 0.681
AMSG_12297
Tr-type G domain-containing protein.
    
 0.681
AMSG_12246
Methyltranfer_dom domain-containing protein.
   
  
 0.520
AMSG_00618
UPF0558 protein.
   
  
 0.465
AMSG_03388
DUF1619 domain-containing protein.
      
 0.416
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.