STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_05138Ribosomal_L7Ae domain-containing protein. (527 aa)    
Predicted Functional Partners:
AMSG_00842
Luminal-binding protein 5; Belongs to the heat shock protein 70 family.
   
 0.874
AMSG_03625
Endoplasmic reticulum oxidoreductin 1.
   
 0.821
AMSG_00033
Sulfite oxidase.
   
 0.819
AMSG_06902
Calreticulin.
   
 0.707
AMSG_03206
Pyridine nucleotide-disulfide oxidoreductase dimerization region.
   
 0.687
AMSG_07189
Pyridine nucleotide-disulfide oxidoreductase dimerization region.
   
 0.687
AMSG_08767
Dihydrolipoyl dehydrogenase.
   
 0.687
AMSG_11356
Mercuric transporter periplasmic component.
   
 0.687
AMSG_05478
Hypoxia up-regulated protein 1.
   
 0.679
AMSG_04714
Peptide methionine sulfoxide reductase msrA.
   
 0.674
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.