STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_04554WD_REPEATS_REGION domain-containing protein. (268 aa)    
Predicted Functional Partners:
AMSG_09792
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.795
AMSG_03791
Cell division control protein 2; Belongs to the protein kinase superfamily.
   
 0.784
AMSG_06890
Serine/threonine protein kinase.
   
 0.784
AMSG_01312
BUB protein kinase.
   
 0.781
AMSG_03884
Cell division cycle 16.
   
 0.779
AMSG_05595
WD_REPEATS_REGION domain-containing protein.
    
 0.774
AMSG_06919
Transcription initiation factor TFIID subunit 12.
   
 0.774
AMSG_01466
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.773
AMSG_03506
WD repeat-containing protein 90.
    
 0.772
AMSG_08994
Transcription initiation factor TFIID subunit 10.
    
 0.772
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.