STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_118822-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2). (1411 aa)    
Predicted Functional Partners:
AMSG_00041
3'-5' exonuclease.
  
 0.993
AMSG_00980
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.993
AMSG_02997
Uncharacterized protein.
   
 0.952
AMSG_08739
DNA mismatch repair protein mlh1.
   
 0.921
AMSG_11780
Uncharacterized protein.
   
 0.877
AMSG_08217
BSD domain-containing protein.
    
 0.876
AMSG_04451
General transcription factor IIH subunit.
    
 0.875
AMSG_04293
General transcription factor IIH subunit 3.
    
 0.874
AMSG_12288
RING-type domain-containing protein.
    
 0.874
AMSG_10648
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.874
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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