STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_06062CAP-Gly domain-containing protein. (304 aa)    
Predicted Functional Partners:
AMSG_06162
25-hydroxyvitamin D3 1alpha-hydroxylase; Belongs to the cytochrome P450 family.
    
 0.619
AMSG_00831
Autophagy protein 7.
    
 
 0.570
AMSG_01910
Mitotic checkpoint protein BUB3.
    
  0.537
AMSG_12067
Uncharacterized protein.
    
  0.536
AMSG_06124
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
  0.535
AMSG_06913
RasGTPase-activating protein.
   
 0.535
AMSG_07404
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
  0.535
AMSG_01984
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
   
  0.535
AMSG_08249
CAP-Gly domain-containing protein.
  
 
   0.529
AMSG_09792
Mitotic spindle assembly checkpoint protein MAD2A.
    
  0.493
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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