STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_06788GTPase activating protein Rap1-GAP. (828 aa)    
Predicted Functional Partners:
AMSG_08945
Ras-like protein Rap-1b.
  
 
  0.538
AMSG_03585
Uncharacterized protein.
   
  0.509
AMSG_03698
BMH1 protein; Belongs to the 14-3-3 family.
    
  0.493
AMSG_04940
14-3-3 family protein epsilon; Belongs to the 14-3-3 family.
    
  0.493
AMSG_04093
Ras-like protein Rap-1b.
  
 
  0.436
AMSG_04916
Ras-like C3 botulinum toxin substrate 1.
    
  0.424
AMSG_00439
Cell division control protein 42.
    
  0.424
AMSG_04690
Ras-like C3 botulinum toxin substrate 1.
    
  0.424
AMSG_10025
Rac2 protein.
    
  0.424
AMSG_10026
Rho GTPase.
    
  0.424
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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