STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00628Phenylalanyl tRNA synthetase 1. (513 aa)    
Predicted Functional Partners:
AMSG_01153
Phenylalanyl-tRNA synthetase, beta subunit.
  
 0.999
AMSG_05953
Prolyl-tRNA synthetase.
  
  
 0.876
AMSG_06549
Phenylalanyl-tRNA synthetase class IIc family protein.
   
 
0.825
AMSG_06447
MRS-1 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.787
AMSG_12293
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
  
  
 0.785
AMSG_01519
Glycosyltransferase family 58 protein.
     
 0.736
AMSG_05585
Seryl-tRNA synthetase.
   
 
 0.705
AMSG_08432
Seryl-tRNA synthetase.
   
 
 0.705
AMSG_10726
Seryl-tRNA synthetase.
   
 
 0.705
AMSG_01453
60S ribosomal protein L10-B.
  
 0.677
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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