STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00723Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. (224 aa)    
Predicted Functional Partners:
AMSG_08314
RNA-binding protein cabeza.
   
 
 0.988
AMSG_01562
RanBP2-type domain-containing protein.
   
 
 0.988
AMSG_10940
Allatostatin protein.
     
 0.986
AMSG_07427
Uncharacterized protein.
   
 0.951
AMSG_09898
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.951
AMSG_12252
Uncharacterized protein.
   
 0.905
AMSG_12306
MI domain-containing protein.
   
 0.905
AMSG_01749
Uncharacterized protein.
   
 0.905
AMSG_01824
ANK_REP_REGION domain-containing protein.
   
 0.905
AMSG_04436
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.880
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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