STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_06009Leucine-rich repeats and guanylate kinase domain containing. (341 aa)    
Predicted Functional Partners:
AMSG_10279
Uncharacterized protein.
   
 0.993
AMSG_01275
Rho-GAP domain-containing protein.
    
 0.987
AMSG_08774
Uncharacterized protein.
   
 0.954
AMSG_02313
Uncharacterized protein.
    
 
 0.888
AMSG_00602
Serine/threonine-protein phosphatase.
   
 0.886
AMSG_10657
Serine/threonine-protein phosphatase.
   
 0.886
AMSG_02893
Ak7-A-prov protein.
   
 0.877
AMSG_05027
Adenylate kinase.
   
 0.877
AMSG_05417
Adenylate kinase B; Belongs to the adenylate kinase family.
   
 0.877
AMSG_02383
Adenylate kinase; Belongs to the adenylate kinase family.
   
 0.877
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.