STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00777Serine/threonine protein kinase. (290 aa)    
Predicted Functional Partners:
AMSG_06984
Uncharacterized protein.
    
 0.920
AMSG_08875
t-SNARE coiled-coil homology domain-containing protein.
    
 0.884
AMSG_01987
Vesicle transporter; Belongs to the synaptobrevin family.
   
 0.877
AMSG_02533
Uncharacterized protein.
    
 0.834
AMSG_06301
Uncharacterized protein.
   
 0.825
AMSG_04250
GARNL1 protein.
    
 0.719
AMSG_04663
BZIP domain-containing protein.
    
  0.666
AMSG_04614
Vesicle-fusing ATPase.
    
 0.648
AMSG_10937
PX domain-containing protein.
     
 0.617
AMSG_03653
Alpha-soluble NSF attachment protein.
    
 0.603
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.