STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_06658Peroxisomal membrane family protein. (489 aa)    
Predicted Functional Partners:
AMSG_10738
Uncharacterized protein.
    
 0.636
AMSG_05333
Enoyl-CoA hydratase/isomerase.
   
 
 0.568
AMSG_01073
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 
 0.565
AMSG_09140
PTS1RS protein.
     
 0.550
AMSG_01046
Uncharacterized protein.
   
 
 0.549
AMSG_00420
Peroxin-11.
   
 
 0.543
AMSG_10720
Peroxisomal membrane protein PEX16.
     
 0.538
AMSG_12430
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.536
AMSG_02163
Sterol-binding domain-containing protein.
   
 
  0.531
AMSG_03903
RING-type domain-containing protein.
     
 0.528
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.