STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_05913SH3 domain-containing protein. (134 aa)    
Predicted Functional Partners:
AMSG_05680
Uncharacterized protein.
   
 0.996
AMSG_03823
Uncharacterized protein.
   
 0.821
AMSG_03992
Uncharacterized protein.
   
 0.821
AMSG_05379
Uncharacterized protein.
   
 0.821
AMSG_05988
Intersectin-1.
   
 0.821
AMSG_11448
SH3 domain-containing protein.
   
 0.821
AMSG_09922
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.762
AMSG_04575
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.640
AMSG_05351
Uncharacterized protein.
    
 0.621
AMSG_07776
Uncharacterized protein.
    
 0.621
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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