STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_07507Aspartyl aminopeptidase; Belongs to the peptidase M18 family. (497 aa)    
Predicted Functional Partners:
AMSG_02155
Autophagy-related protein.
   
 
 0.715
AMSG_12285
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.611
AMSG_02754
Peptidase; Belongs to the peptidase M24B family.
   
 
 0.540
AMSG_05620
Xaa-Pro aminopeptidase 3.
   
 
 0.480
AMSG_06810
Hyphothetical protein.
    
  0.477
AMSG_08217
BSD domain-containing protein.
    
   0.453
AMSG_02028
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
      
 0.453
AMSG_08124
PfkB domain-containing protein.
 
      0.449
AMSG_08711
Condensin-2 complex subunit H2.
      
 0.448
AMSG_08407
Phosphoglycolate phosphatase.
 
 
    0.441
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.