STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_00756HORMA domain-containing protein. (574 aa)    
Predicted Functional Partners:
AMSG_10990
Thyroid receptor-interacting protein 13; Belongs to the AAA ATPase family.
   
 
 0.612
AMSG_01660
Uncharacterized protein.
      
 0.568
AMSG_05795
Mnd1 family protein; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.
    
 
 0.566
AMSG_04757
Structural maintenance of chromosomes protein.
    
 
 0.560
AMSG_00757
RAD51/dmc1 protein; Belongs to the RecA family.
   
 
 0.558
AMSG_02375
Rad51 DNA recombinase 3.
   
 
 0.558
AMSG_00020
MutS domain III family protein.
   
  
 0.524
AMSG_04717
SUN domain-containing protein.
   
  
 0.470
AMSG_09251
Structural maintenance of chromosomes protein.
    
 
 0.456
AMSG_06928
Cold-induced protein.
      
 0.453
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.