AMSG_07813 protein (Thecamonas trahens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AMSG_07813

Uncharacterized protein. (936 aa)

Predicted Functional Partners:

AMSG_01540

0.907

AMSG_01122

0.900

AMSG_06912

0.899

AMSG_03605

0.897

AMSG_05718

0.897

AMSG_02318

0.883

AMSG_07555

0.879

AMSG_08220

0.873

AMSG_06075

0.869

AMSG_08443

0.858

Your Current Organism:

Thecamonas trahens

NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMSG_01122	AMSG_01540	A0A0L0DJB3	A0A0L0DQW3	RNA-binding protein 28.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.932
AMSG_01122	AMSG_02318	A0A0L0DJB3	A0A0L0DVZ5	RNA-binding protein 28.	Ribosome biogenesis protein WDR12.	0.916
AMSG_01122	AMSG_03605	A0A0L0DJB3	A0A0L0D489	RNA-binding protein 28.	Uncharacterized protein.	0.952
AMSG_01122	AMSG_05718	A0A0L0DJB3	A0A0L0DCX6	RNA-binding protein 28.	Nucleolar complex protein 14.	0.862
AMSG_01122	AMSG_06075	A0A0L0DJB3	A0A0L0DBS9	RNA-binding protein 28.	U3 small nucleolar RNA-associated protein.	0.916
AMSG_01122	AMSG_06912	A0A0L0DJB3	A0A0L0DDN1	RNA-binding protein 28.	DEAD box polypeptide 52.	0.714
AMSG_01122	AMSG_07555	A0A0L0DJB3	A0A0L0DH21	RNA-binding protein 28.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.920
AMSG_01122	AMSG_07813	A0A0L0DJB3	A0A0L0DHA8	RNA-binding protein 28.	Uncharacterized protein.	0.900
AMSG_01122	AMSG_08220	A0A0L0DJB3	A0A0L0DI41	RNA-binding protein 28.	WD repeat-containing protein 74.	0.757
AMSG_01122	AMSG_08443	A0A0L0DJB3	A0A0L0DKM4	RNA-binding protein 28.	CCAAT/enhancer binding protein zeta.	0.970
AMSG_01540	AMSG_01122	A0A0L0DQW3	A0A0L0DJB3	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	RNA-binding protein 28.	0.932
AMSG_01540	AMSG_02318	A0A0L0DQW3	A0A0L0DVZ5	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Ribosome biogenesis protein WDR12.	0.999
AMSG_01540	AMSG_03605	A0A0L0DQW3	A0A0L0D489	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.999
AMSG_01540	AMSG_05718	A0A0L0DQW3	A0A0L0DCX6	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Nucleolar complex protein 14.	0.870
AMSG_01540	AMSG_06075	A0A0L0DQW3	A0A0L0DBS9	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	U3 small nucleolar RNA-associated protein.	0.785
AMSG_01540	AMSG_06912	A0A0L0DQW3	A0A0L0DDN1	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	DEAD box polypeptide 52.	0.805
AMSG_01540	AMSG_07555	A0A0L0DQW3	A0A0L0DH21	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.999
AMSG_01540	AMSG_07813	A0A0L0DQW3	A0A0L0DHA8	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.907
AMSG_01540	AMSG_08220	A0A0L0DQW3	A0A0L0DI41	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	WD repeat-containing protein 74.	0.985
AMSG_01540	AMSG_08443	A0A0L0DQW3	A0A0L0DKM4	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	CCAAT/enhancer binding protein zeta.	0.960